author | Radek Brich <radek.brich@devl.cz> |
Wed, 09 Jul 2014 18:03:54 +0200 | |
changeset 104 | d8ff52a0390f |
parent 101 | 2a2d0d5df03b |
permissions | -rwxr-xr-x |
93
b72591087495
Change python3.2 to python3 in scripts.
Radek Brich <brich.radek@ifortuna.cz>
parents:
83
diff
changeset
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#!/usr/bin/env python3 |
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from pydbkit import toolbase |
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class BatchQueryTool(toolbase.SimpleTool): |
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def __init__(self): |
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toolbase.SimpleTool.__init__(self, name='batchquery', desc='Run a query using columns from CSV file as arguments.') |
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self.parser.add_argument('--query', dest='query', type=str, help='Query to run. Use %%s for arguments, or %%(name)s for named arguments (see --header).') |
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self.parser.add_argument('--file', dest='file', type=str, help='CSV file with data to use as arguments.') |
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self.parser.add_argument('--init', dest='init', type=str, help='Query which initialize database session (eg. temporary function).') |
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self.parser.add_argument('--output', dest='output', type=str, help='File name for results.') |
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30
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
13 |
self.parser.add_argument('--outputfunc', dest='outputfunc', type=str, help='Python function which will format results (format_row(args, rows)).') |
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self.parser.add_argument('--header', dest='header', action='store_true', help='First line of CSV is header with names for columns. These name can be used in query.') |
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def _split_line(self, line): |
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return [x.strip() for x in line.split(',')] |
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def main(self): |
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results = [] |
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# load query from file |
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with open(self.args.query, 'r', encoding='utf8') as f: |
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query = f.read() |
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# connect DB |
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with self.pgm.cursor('target') as curs: |
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# run init query |
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if self.args.init: |
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with open(self.args.init, 'r', encoding='utf8') as f: |
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curs.execute(f.read(), []) |
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# read CSV file |
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with open(self.args.file, 'r', encoding='utf8') as f: |
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# read header |
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names = None |
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if self.args.header: |
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line = f.readline() |
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names = self._split_line(line) |
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# read and process lines |
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for line in f: |
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args = self._split_line(line) |
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if names: |
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args = dict(zip(names, args)) |
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curs.execute(query, args) |
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rows = curs.fetchall() |
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results.append((args, rows)) |
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curs.connection.commit() |
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# write results to output file |
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if self.args.output: |
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30
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
48 |
format_row = None |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
49 |
if self.args.outputfunc: |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
50 |
with open(self.args.outputfunc, 'r', encoding='utf8') as f: |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
51 |
d = dict() |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
52 |
exec(f.read(), d) |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
53 |
format_row = d['format_row'] |
83
515fadd3d286
Add dependency on pycolib. Move common modules to pycolib. Add example table schema for meta DB.
Radek Brich <radek.brich@devl.cz>
parents:
39
diff
changeset
|
54 |
|
29 | 55 |
with open(self.args.output, 'w', encoding='utf8') as f: |
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for args, rows in results: |
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30
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
57 |
if format_row: |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
58 |
f.write(format_row(args, rows)) |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
59 |
else: |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
60 |
f.write(repr(args)) |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
61 |
f.write(' -> ') |
a8b7cd92f39f
Fix analyzeall tool. Add user output formating to batchquery tool. Add isolation_level setting support to ToolBase.
Radek Brich <radek.brich@devl.cz>
parents:
29
diff
changeset
|
62 |
f.write(repr(rows)) |
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f.write('\n') |
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tool = BatchQueryTool() |
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101
2a2d0d5df03b
Refactor ToolBase to allow tool composition. Add TableSync tool (composited). Move more tools under pgtool.
Radek Brich <brich.radek@ifortuna.cz>
parents:
93
diff
changeset
|
67 |
tool.setup() |
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tool.main() |
69 |